@article {2018|2088,
	title = {From Virtual Reality to Immersive Analytics in Bioinformatics.},
	journal = {J Integr Bioinform},
	volume = {15},
	year = {2018},
	month = {2018 Jul 09},
	abstract = {<p>Bioinformatics-related research produces huge heterogeneous amounts of data. This wealth of information includes data describing metabolic mechanisms and pathways, proteomics, transcriptomics, and metabolomics. Often, the visualization and exploration of related structural - usually molecular - data plays an important role in the aforementioned contexts. For decades, virtual reality (VR)-related technologies were developed and applied to Bioinformatics problems. Often, these approaches provide \&quot;just\&quot; visual support of the analysis, e.g. in the case of exploring and interacting with a protein on a 3D monitor and compatible interaction hardware. Moreover, in the past these approaches were limited to cost-intensive professional visualization facilities. The advent of new affordable, and often mobile technologies, provides high potential for using similar approaches on a regular basis for daily research. Visual Analytics is successfully being used for several years to analyze complex and heterogeneous datasets. Immersive Analytics combines these approaches now with new immersive and interactive technologies. This publication provides a short overview of related technologies, their history and Bioinformatics-related approaches. Six new applications on the path from VR to Immersive Analytics are being introduced and discussed.</p>
},
	keywords = {Computer Graphics, Imaging, Three-Dimensional, Molecular Conformation, Proteins, Software, User-Computer Interface, Virtual Reality},
	issn = {1613-4516},
	doi = {10.1515/jib-2018-0043},
	author = {Sommer, Bj{\"o}rn and Marc Baaden and Krone, Michael and Woods, Andrew}
}
@inbook {2014|1720,
	title = {Foundations of Biomolecular Simulations: A Critical Introduction to Homology Modeling, Molecular Dynamics Simulations, and Free Energy Calculations of Membrane Proteins},
	booktitle = {Membrane Proteins Production for Structural Analysis},
	year = {2014},
	pages = {347{\textendash}392},
	publisher = {Springer New York},
	organization = {Springer New York},
	author = {J{\'e}r{\^o}me H{\'e}nin and Marc Baaden and Antoine Taly}
}
@article {2013|1525,
	title = {{F}ormation of raft-like assemblies within clusters of influenza hemagglutinin observed by {M}{D} simulations},
	journal = {Plos Comput. Biol.},
	volume = {9},
	number = {4},
	year = {2013},
	month = {apr},
	pages = {e1003034},
	author = {Parton, D. L. and Tek, A. and Marc Baaden and Sansom, M. S.}
}
@conference {2011,
	title = {FvNano: A Virtual Laboratory to Manipulate Molecular Systems},
	booktitle = {1st IEEE symposium on biological data visualization, Providence, RI @ ieee visweek, 2011, N$\#$ 136},
	year = {2011},
	url = {http://www.biovis.net/materials/abstracts/BioVispaper136.pdf},
	author = {Matthieu Chavent and Marc Piuzzi and Alex Tek and Marc Baaden}
}
@article {2010|1613,
	title = {Functional Modes and Residue Flexibility Control the Anisotropic Response of Guanylate Kinase to Mechanical Stress},
	journal = {Biophys. J.},
	volume = {99},
	number = {10},
	year = {2010},
	pages = {3412{\textendash}3419},
	doi = {10.1016/j.bpj.2010.09.026},
	author = {S Sacquin-Mora and Delalande, O. and Marc Baaden}
}
@conference {2008|1557,
	title = {From Interactive to Immersive Molecular Dynamics},
	booktitle = {Workshop on Virtual Reality Interaction and Physical Simulation (VRIPHYS 08 - Eurographics)},
	year = {2008},
	month = {nov},
	pages = {89{\textendash}96},
	address = {Grenoble - France},
	author = {Nicolas F{\'e}rey and O. Delalande and G. Grasseau and Marc Baaden},
	editor = {F. Faure and M. Teschner}
}
